jprotein.tree.tools
Class ET

java.lang.Object
  extended by jprotein.tree.tools.ET

public class ET
extends java.lang.Object


Constructor Summary
ET(java.lang.String matrixFile)
           
 
Method Summary
 java.util.Vector generateTraceRecord(MultiAlignment ma, Sequence ref)
           
 double[] getRelativeTraceDepth(java.util.Vector traceLevels, double coverage)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

ET

public ET(java.lang.String matrixFile)
Method Detail

generateTraceRecord

public java.util.Vector generateTraceRecord(MultiAlignment ma,
                                            Sequence ref)
                                     throws java.lang.Exception
Throws:
java.lang.Exception

getRelativeTraceDepth

public double[] getRelativeTraceDepth(java.util.Vector traceLevels,
                                      double coverage)