Uses of Class
jprotein.data.datatype.MultiAlignment

Packages that use MultiAlignment
jprotein.tree.tools   
 

Uses of MultiAlignment in jprotein.tree.tools
 

Methods in jprotein.tree.tools with parameters of type MultiAlignment
 java.util.Vector ET.generateTraceRecord(MultiAlignment ma, Sequence ref)
           
 void DistanceMatrix.setMultipleAlignment(MultiAlignment multiAlignment)
           
 

Constructors in jprotein.tree.tools with parameters of type MultiAlignment
DistanceMatrix(MultiAlignment multiAlignment, SubstitutionMatrix sm)
           
NJ(MultiAlignment multiAlignment, SubstitutionMatrix sm)