jprotein.data.datatype
Class Residue

java.lang.Object
  extended by jprotein.data.datatype.Residue
Direct Known Subclasses:
IndexedResidue, Residue3D

public class Residue
extends java.lang.Object

Classe pour gerer les codes, symboles des residus, la position et l'accessibilite du residu


Constructor Summary
Residue(char residueName)
           
Residue(java.lang.String residueName)
           
 
Method Summary
 boolean equals(java.lang.Object o)
           
 int getPosition()
           
 java.lang.String getResidueCode()
           
static java.lang.String getResidueCode(int index)
           
 int getResidueIndex()
           
static int getResidueIndex(char residueName)
           
static int getResidueIndex(java.lang.String residueName)
           
 char getResidueSymbol()
           
static char getResidueSymbol(int index)
           
 boolean isAccessible()
           
 void setAccessibility(boolean access)
           
 void setPosition(int pos)
           
 java.lang.String toString()
           
 
Methods inherited from class java.lang.Object
getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

Residue

public Residue(java.lang.String residueName)

Residue

public Residue(char residueName)
Method Detail

getResidueIndex

public int getResidueIndex()

getResidueIndex

public static int getResidueIndex(char residueName)

getResidueIndex

public static int getResidueIndex(java.lang.String residueName)

getResidueSymbol

public static char getResidueSymbol(int index)

getResidueCode

public static java.lang.String getResidueCode(int index)

getResidueCode

public java.lang.String getResidueCode()

getResidueSymbol

public char getResidueSymbol()

toString

public java.lang.String toString()
Overrides:
toString in class java.lang.Object

equals

public boolean equals(java.lang.Object o)
Overrides:
equals in class java.lang.Object

isAccessible

public boolean isAccessible()

setAccessibility

public void setAccessibility(boolean access)

setPosition

public void setPosition(int pos)

getPosition

public int getPosition()