jprotein.data.dataformat.parser
Class Blast
java.lang.Object
jprotein.data.dataformat.parser.Blast
- Direct Known Subclasses:
- BlastPairwise
public class Blast
- extends java.lang.Object
Constructor Summary |
Blast()
|
Methods inherited from class java.lang.Object |
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Blast
public Blast()
filterSequenceIdentities
public static void filterSequenceIdentities(java.util.Vector sequenceList,
int low,
int high)
filterSequenceEValues
public static void filterSequenceEValues(java.util.Vector sequenceList,
double max)
filterSequenceLengths
public static void filterSequenceLengths(java.util.Vector sequenceList,
int low,
int high)
removeRedundance
public static void removeRedundance(java.util.Vector sequenceList)
getSequenceInfo
public static java.util.Vector getSequenceInfo(Format bf)