A B C D E F G H I J L M N O P R S T U V W Z

R

readFile(String) - Static method in class jprotein.io.file.FileIO
 
readFile() - Method in class jprotein.io.file.PdbFileReader2
 
readPdbFile(File, File) - Static method in class jprotein.JET
Fonction qui lit le fichier pdb et lance le traitement de ce fichier
readPdbFile(File, File) - Static method in class jprotein.PsiJET
 
removeDistance(int) - Method in class jprotein.tree.data.Leaf
 
removeRedundance(Vector) - Static method in class jprotein.data.dataformat.parser.Blast
 
render(Graphics2D) - Method in class jprotein.tree.data.VisualLeaf
 
render(Graphics2D) - Method in class jprotein.tree.data.VisualNode
 
resample(Vector, int) - Static method in class jprotein.tools.Statistic
 
resample(Vector, int) - Static method in class jprotein.tree.tools.Statistic
 
reset() - Method in class jprotein.rasmol.ProteinEngine3D
 
reset() - Method in class jprotein.tree.Window
 
resetConservedResidue() - Method in class jprotein.tree.data.Leaf
 
resetConservedResidue() - Method in class jprotein.tree.data.SimpleNode
 
Residue - Class in jprotein.data.datatype
Classe pour gerer les codes, symboles des residus, la position et l'accessibilite du residu
Residue(String) - Constructor for class jprotein.data.datatype.Residue
 
Residue(char) - Constructor for class jprotein.data.datatype.Residue
 
Residue3D - Class in jprotein.data.datatype
On ajoute une chaine squelette, une chaine laterale (composes d'atomes), un centre de gravite, un rayon max (par rapport au centre de gravite) et un sequence_break (?)
Residue3D(String) - Constructor for class jprotein.data.datatype.Residue3D
CONSTRUCTEURS
Residue3D(String, int) - Constructor for class jprotein.data.datatype.Residue3D
 
ResidueModel - Class in jprotein.rasmol.model
 
ResidueModel(Residue3D, int, Color3f) - Constructor for class jprotein.rasmol.model.ResidueModel
 
RIGHT - Static variable in class jprotein.tree.tools.Tree
 
rootMidTree(SimpleNode, Leaf, Leaf) - Method in class jprotein.tree.tools.Tree
 
rootTree() - Method in class jprotein.tree.tools.NJ
 
run() - Method in class jprotein.ProgressIndicator
 

A B C D E F G H I J L M N O P R S T U V W Z