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## Uses of Class
jprotein.data.datatype.Sequence3D

Packages that use Sequence3D
jprotein |
jprotein.cluster |
jprotein.cluster.data |
jprotein.data.dataformat.info |
jprotein.rasmol |
jprotein.tools |

Uses of Sequence3D in jprotein

Methods in jprotein with parameters of type Sequence3D
`static java.util.Vector` | `TestAccess.access2PDB(Sequence3D ref, double minAccess, float probeRadius)`
`static java.util.Vector` | `TestAccess.getInterface(Sequence3D seqR, Sequence3D seqL, double minDist)` interface method

Uses of Sequence3D in jprotein.cluster

Constructors in jprotein.cluster with parameters of type Sequence3D
`Clustering(Sequence3D sequence, float radius)`

Uses of Sequence3D in jprotein.cluster.data

Methods in jprotein.cluster.data with parameters of type Sequence3D
`void` | `DistanceMap.initDistanceMap(Sequence3D seq)`

Constructors in jprotein.cluster.data with parameters of type Sequence3D
`DistanceMap(Sequence3D seq)`

Uses of Sequence3D in jprotein.data.dataformat.info

Methods in jprotein.data.dataformat.info that return Sequence3D
`Sequence3D` | `PdbSequenceInfo.getSequence()`

Constructors in jprotein.data.dataformat.info with parameters of type Sequence3D
`PdbSequenceInfo(Sequence3D seq, java.util.Vector propertyData)`

Uses of Sequence3D in jprotein.rasmol

Constructors in jprotein.rasmol with parameters of type Sequence3D
`SequenceAppearance(Sequence3D sequence)`
`SequenceAppearance(Sequence3D sequence, Property property)`

Uses of Sequence3D in jprotein.tools

Methods in jprotein.tools with parameters of type Sequence3D
`static java.util.Vector` | `MapContact.map(Sequence3D seq1, Sequence3D seq2, float minCutoff)`
`java.util.Vector` | `MapClusters.map(Sequence3D ref, java.util.Vector trace, float cutoff)`
`static java.util.Vector` | `MapAccess.mapToBoolean(Sequence3D ref, double minAccess, float probeRadius)`
`static java.util.Vector` | `MapAccess.mapToDouble(Sequence3D ref, double minAccess, float probeRadius)`

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