Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV CLASS NEXT CLASS | FRAMES NO FRAMES
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD

## jprotein.io.file
Class PdbFileReader2

    java.lang.Object
      jprotein.io.file.PdbFileReader2

    public class PdbFileReader2

extends java.lang.Object

Constructor Summary
`PdbFileReader2(java.lang.String path)`

Method Summary
`void` | `extractAtomCoordinates()`
`void` | `extractAtomCoordinates2()`
`void` | `extractAtomCoordinates3()`
`void` | `extractSequence()`
`void` | `extractSequenceHeader()`
`void` | `extractSequenceLimits()`
`void` | `genericAtomCoordinatesExtraction()`
`java.util.Vector` | `getSequenceData()`
`java.lang.String` | `getSequenceHeader()`
`void` | `readFile()`

Methods inherited from class java.lang.Object
`equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait`

Constructor Detail

### PdbFileReader2

    public PdbFileReader2(java.lang.String path)

Method Detail

### getSequenceData

    public java.util.Vector getSequenceData()

### readFile

    public void readFile()

### getSequenceHeader

    public java.lang.String getSequenceHeader()

### extractSequenceHeader

    public void extractSequenceHeader()

### extractSequenceLimits

    public void extractSequenceLimits()

### extractSequence

    public void extractSequence()

### genericAtomCoordinatesExtraction

    public void genericAtomCoordinatesExtraction()

### extractAtomCoordinates

    public void extractAtomCoordinates()

### extractAtomCoordinates2

    public void extractAtomCoordinates2()

### extractAtomCoordinates3

    public void extractAtomCoordinates3()

Overview | Package | Class | Use | Tree | Deprecated | Index | Help
PREV CLASS NEXT CLASS | FRAMES NO FRAMES
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD