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## Uses of Class
jprotein.data.datatype.MultiAlignment

Packages that use MultiAlignment
jprotein.tree.tools |

Uses of MultiAlignment in jprotein.tree.tools

Methods in jprotein.tree.tools with parameters of type MultiAlignment
`java.util.Vector` | `ET.generateTraceRecord(MultiAlignment ma, Sequence ref)`
`void` | `DistanceMatrix.setMultipleAlignment(MultiAlignment multiAlignment)`

Constructors in jprotein.tree.tools with parameters of type MultiAlignment
`DistanceMatrix(MultiAlignment multiAlignment, SubstitutionMatrix sm)`
`NJ(MultiAlignment multiAlignment, SubstitutionMatrix sm)`

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