Supplementary material for

Insights on the evolution of metabolic networks of unicellular translationally biased organisms from transcriptomic data and sequence analysis

A.Carbone, R.Madden

Journal of Molecular Evolution, 2005

  1. Data for Figure 1 (tabbed file):
    a listing by organism and pathway of both CAI means and RPI values
  2. Data for Figure 3 (tabbed file):
    a listing by 'state' (expression values and CAI) of the pathways together with the mean value over the pathway and an 'RPI' evaluated over the 'state'

 
 
Transcriptional data (concerning a set of 4849 genes) for Saccharomyces cerevisiae taken from the study reported in

F.C.P.Holstege, E.G.Jennings, J.J.Wyrick, T.I.Lee, C.J.Hengartner, M.R.Green, T.R.Golub, E.S.Lander, R.A.Young. "Dissecting the regulatory circuitry of a eukaryotic genome", Cell, 95:717--728, November 25, 1998.

Data downloaded from http://www.wi.mit.edu/young/expression.html in 1999.