jprotein.io.file
Class PdbFileReader2

java.lang.Object
  extended by jprotein.io.file.PdbFileReader2

public class PdbFileReader2
extends java.lang.Object


Constructor Summary
PdbFileReader2(java.lang.String path)
           
 
Method Summary
 void extractAtomCoordinates()
           
 void extractAtomCoordinates2()
           
 void extractAtomCoordinates3()
           
 void extractSequence()
           
 void extractSequenceHeader()
           
 void extractSequenceLimits()
           
 void genericAtomCoordinatesExtraction()
           
 java.util.Vector getSequenceData()
           
 java.lang.String getSequenceHeader()
           
 void readFile()
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

PdbFileReader2

public PdbFileReader2(java.lang.String path)
Method Detail

getSequenceData

public java.util.Vector getSequenceData()

readFile

public void readFile()

getSequenceHeader

public java.lang.String getSequenceHeader()

extractSequenceHeader

public void extractSequenceHeader()

extractSequenceLimits

public void extractSequenceLimits()

extractSequence

public void extractSequence()

genericAtomCoordinatesExtraction

public void genericAtomCoordinatesExtraction()

extractAtomCoordinates

public void extractAtomCoordinates()

extractAtomCoordinates2

public void extractAtomCoordinates2()

extractAtomCoordinates3

public void extractAtomCoordinates3()