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Packages that use Sequence3D | |
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jprotein | |
jprotein.cluster | |
jprotein.cluster.data | |
jprotein.data.dataformat.info | |
jprotein.rasmol | |
jprotein.tools |
Uses of Sequence3D in jprotein |
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Methods in jprotein with parameters of type Sequence3D | |
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static java.util.Vector |
TestAccess.access2PDB(Sequence3D ref,
double minAccess,
float probeRadius)
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static java.util.Vector |
TestAccess.getInterface(Sequence3D seqR,
Sequence3D seqL,
double minDist)
interface method |
Uses of Sequence3D in jprotein.cluster |
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Constructors in jprotein.cluster with parameters of type Sequence3D | |
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Clustering(Sequence3D sequence,
float radius)
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Uses of Sequence3D in jprotein.cluster.data |
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Methods in jprotein.cluster.data with parameters of type Sequence3D | |
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void |
DistanceMap.initDistanceMap(Sequence3D seq)
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Constructors in jprotein.cluster.data with parameters of type Sequence3D | |
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DistanceMap(Sequence3D seq)
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Uses of Sequence3D in jprotein.data.dataformat.info |
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Methods in jprotein.data.dataformat.info that return Sequence3D | |
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Sequence3D |
PdbSequenceInfo.getSequence()
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Constructors in jprotein.data.dataformat.info with parameters of type Sequence3D | |
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PdbSequenceInfo(Sequence3D seq,
java.util.Vector propertyData)
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Uses of Sequence3D in jprotein.rasmol |
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Constructors in jprotein.rasmol with parameters of type Sequence3D | |
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SequenceAppearance(Sequence3D sequence)
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SequenceAppearance(Sequence3D sequence,
Property property)
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Uses of Sequence3D in jprotein.tools |
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Methods in jprotein.tools with parameters of type Sequence3D | |
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static java.util.Vector |
MapContact.map(Sequence3D seq1,
Sequence3D seq2,
float minCutoff)
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java.util.Vector |
MapClusters.map(Sequence3D ref,
java.util.Vector trace,
float cutoff)
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static java.util.Vector |
MapAccess.mapToBoolean(Sequence3D ref,
double minAccess,
float probeRadius)
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static java.util.Vector |
MapAccess.mapToDouble(Sequence3D ref,
double minAccess,
float probeRadius)
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