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readFile(String)
- Static method in class jprotein.io.file.
FileIO
readFile()
- Method in class jprotein.io.file.
PdbFileReader2
readPdbFile(File, File)
- Static method in class jprotein.
JET
Fonction qui lit le fichier pdb et lance le traitement de ce fichier
readPdbFile(File, File)
- Static method in class jprotein.
PsiJET
removeDistance(int)
- Method in class jprotein.tree.data.
Leaf
removeRedundance(Vector)
- Static method in class jprotein.data.dataformat.parser.
Blast
render(Graphics2D)
- Method in class jprotein.tree.data.
VisualLeaf
render(Graphics2D)
- Method in class jprotein.tree.data.
VisualNode
resample(Vector, int)
- Static method in class jprotein.tools.
Statistic
resample(Vector, int)
- Static method in class jprotein.tree.tools.
Statistic
reset()
- Method in class jprotein.rasmol.
ProteinEngine3D
reset()
- Method in class jprotein.tree.
Window
resetConservedResidue()
- Method in class jprotein.tree.data.
Leaf
resetConservedResidue()
- Method in class jprotein.tree.data.
SimpleNode
Residue
- Class in
jprotein.data.datatype
Classe pour gerer les codes, symboles des residus, la position et l'accessibilite du residu
Residue(String)
- Constructor for class jprotein.data.datatype.
Residue
Residue(char)
- Constructor for class jprotein.data.datatype.
Residue
Residue3D
- Class in
jprotein.data.datatype
On ajoute une chaine squelette, une chaine laterale (composes d'atomes), un centre de gravite, un rayon max (par rapport au centre de gravite) et un sequence_break (?)
Residue3D(String)
- Constructor for class jprotein.data.datatype.
Residue3D
CONSTRUCTEURS
Residue3D(String, int)
- Constructor for class jprotein.data.datatype.
Residue3D
ResidueModel
- Class in
jprotein.rasmol.model
ResidueModel(Residue3D, int, Color3f)
- Constructor for class jprotein.rasmol.model.
ResidueModel
RIGHT
- Static variable in class jprotein.tree.tools.
Tree
rootMidTree(SimpleNode, Leaf, Leaf)
- Method in class jprotein.tree.tools.
Tree
rootTree()
- Method in class jprotein.tree.tools.
NJ
run()
- Method in class jprotein.
ProgressIndicator
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