Uses of Class
jprotein.data.datatype.Residue3D

Packages that use Residue3D

jprotein.cluster.data
jprotein.data.datatype
jprotein.rasmol.model

Uses of Residue3D in jprotein.cluster.data

Methods in jprotein.cluster.data that return Residue3D

Residue3D	ProxNode.getResidue()
Residue3D	ProxList.getResidue()

Methods in jprotein.cluster.data with parameters of type Residue3D

boolean	Cluster.isNeighbour(Residue3D residue)
void	ProxList.setResidue(Residue3D residue)

Constructors in jprotein.cluster.data with parameters of type Residue3D

ProxList(Residue3D residue, int id)

Uses of Residue3D in jprotein.data.datatype

Methods in jprotein.data.datatype that return Residue3D

Residue3D

Sequence3D.getResidue(int index, int mode)

Methods in jprotein.data.datatype with parameters of type Residue3D

void	Sequence3D.addResidue(Residue3D residue)
float	Atom1.distance(Residue3D residue)
float	Residue3D.distance(Residue3D residue) Calcul de la distance entre les 2 carbones alpha de 2 residus.
float	Atom.distance(Residue3D residue)
float	Residue3D.minAtomDistance(Residue3D residue) Calcul de la distance minimale entre deux residus (en comparant les distance entre leur atomes).
float	Residue3D.minSideChainDistance(Residue3D residue) Calcul de la distance minimale entre deux chaines laterales de deux residus (en comparant les distance entre leur atomes).

Uses of Residue3D in jprotein.rasmol.model

Methods in jprotein.rasmol.model that return Residue3D

Residue3D

ResidueModel.getResidue()

Constructors in jprotein.rasmol.model with parameters of type Residue3D

ResidueModel(Residue3D residue, int index, javax.vecmath.Color3f defaultColor)