jprotein.rasmol.model
Class ResidueModel

java.lang.Object
  javax.media.j3d.SceneGraphObject
      javax.media.j3d.Node
          javax.media.j3d.Group
              javax.media.j3d.TransformGroup
                  jprotein.rasmol.model.ResidueModel

public class ResidueModel
extends javax.media.j3d.TransformGroup

Field Summary

Fields inherited from class javax.media.j3d.TransformGroup

ALLOW_TRANSFORM_READ, ALLOW_TRANSFORM_WRITE

Fields inherited from class javax.media.j3d.Group

ALLOW_CHILDREN_EXTEND, ALLOW_CHILDREN_READ, ALLOW_CHILDREN_WRITE, ALLOW_COLLISION_BOUNDS_READ, ALLOW_COLLISION_BOUNDS_WRITE

Fields inherited from class javax.media.j3d.Node

ALLOW_AUTO_COMPUTE_BOUNDS_READ, ALLOW_AUTO_COMPUTE_BOUNDS_WRITE, ALLOW_BOUNDS_READ, ALLOW_BOUNDS_WRITE, ALLOW_COLLIDABLE_READ, ALLOW_COLLIDABLE_WRITE, ALLOW_LOCAL_TO_VWORLD_READ, ALLOW_LOCALE_READ, ALLOW_PARENT_READ, ALLOW_PICKABLE_READ, ALLOW_PICKABLE_WRITE, ENABLE_COLLISION_REPORTING, ENABLE_PICK_REPORTING

Constructor Summary

ResidueModel(Residue3D residue, int index, javax.vecmath.Color3f defaultColor)

Method Summary

int	getIndex()
javax.vecmath.Point3f	getPosition()
Residue3D	getResidue()
java.util.Vector	getSphereList()
void	modifyAppearance(javax.vecmath.Color3f color, boolean transparent)
void	setIndex(int index)
java.lang.String	toString()

Methods inherited from class javax.media.j3d.TransformGroup

cloneNode, getTransform, setTransform

Methods inherited from class javax.media.j3d.Group

addChild, getAllChildren, getAlternateCollisionTarget, getChild, getCollisionBounds, indexOfChild, insertChild, moveTo, numChildren, removeAllChildren, removeChild, removeChild, setAlternateCollisionTarget, setChild, setCollisionBounds

Methods inherited from class javax.media.j3d.Node

cloneTree, cloneTree, cloneTree, cloneTree, cloneTree, cloneTree, duplicateNode, getBounds, getBoundsAutoCompute, getCollidable, getLocale, getLocalToVworld, getLocalToVworld, getParent, getPickable, setBounds, setBoundsAutoCompute, setCollidable, setPickable

Methods inherited from class javax.media.j3d.SceneGraphObject

clearCapability, clearCapabilityIsFrequent, getCapability, getCapabilityIsFrequent, getName, getUserData, isCompiled, isLive, setCapability, setCapabilityIsFrequent, setName, setUserData, updateNodeReferences

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

ResidueModel

public ResidueModel(Residue3D residue,
                    int index,
                    javax.vecmath.Color3f defaultColor)

Method Detail

getIndex

public int getIndex()

setIndex

public void setIndex(int index)

getSphereList

public java.util.Vector getSphereList()

getPosition

public javax.vecmath.Point3f getPosition()

toString

public java.lang.String toString()

Overrides:

toString in class javax.media.j3d.SceneGraphObject

getResidue

public Residue3D getResidue()

modifyAppearance

public void modifyAppearance(javax.vecmath.Color3f color,
                             boolean transparent)