Professor in Computer Science
- Sorbonne Université
Senior member of the Institut Universitaire de France, 2013-2018, 2023-2028
Head of the Analytical
Genomics lab, LCQB, CNRS-SU
Head of the Computational and Quantitative Biology Unit, UMR 7238 CNRS-SU
PhD in Mathematics from The Graduate School
of the City University of New York, 1993. Postdocs at
Université Paris 7 (1993-1995) and at Technische
Universität Wien (1995-1996). Associate Professor
at the Department of Computer Science, Université
Paris 12, 1996-2003. Visiting Professor (on leave) at
the Institut des Hautes Études Scientifiques, Bures-sur-Yvette,
2000-2003.
MAIN RESEARCH AREAS (present and past)
Combinatorial and Statistical Methods in Molecular Biology
Deep Learning, Machine Learning and Algorithms in Computational Biology
DNA Nanotechnologies and DNA Tiling
Proof Theory and Complexity Theory
Graph Theory
Finite Automata and Symbolic Dynamics
Description of current projects
VIEWS
Réinventer la biologie - in "Binaire: la science au coeur du numérique", Le Monde blog - interview on the impact of computer science in science and society
Desktop power helps map protein dance - interview in ScienceNode on our protein-protein interactions project
on women in mathematics
(sur les femmes en mathématiques)
Proof Theory on the eve of the year 2000 (answer to Sol Feferman's invitation)
VIDEOS FOR THE LARGE PUBLIC
What can protein tell us? - A view for the large public on our computational approaches to predict protein interactions, model protein social behaviour and infer the effect of mutations on protein interaction networks. To access the french and italian versions: Que peuvent nous dire les proteines ? - Cosa possono dirci le proteine?
Help Cure Muscular Dystrophy - live webcast with World Community Grid
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