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Alessandra Carbone |
| Professor, Department
of Computer Science, Université Pierre et Marie Curie |
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Hugues Richard |
| Assistant
Professor, Department of Computer Science, Université Pierre et Marie
Curie |
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| Statistical signals in genomes |
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| PhD student,
co-tutelle, Université Pierre et Marie Curie and Universidade Federal de Rio de Janeiro (Brasil) |
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| Detection of weakly homologous proteins |
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Linda Dib |
| PhD student,
EDITE, Université Pierre et Marie Curie |
| Adjunct
lecturer (moniteur), UPMC |
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Protein
coevolution
Motif finding for the detection of weakly homologous proteins |
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Guénola Drillon |
| PhD student,
EDITE, Université Pierre et Marie Curie |
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Chromosomal rearrangements,
evolution in yeast genomes |
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Anthony Mathelier |
| PhD student,
EDITE, Université Pierre et Marie Curie |
| Teaching assistant (ATER), Department of Computer Science, UPMC |
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Detection of miRNA and pre-miRNA
in genomes.
Detection of clusters of miRNAs and discovery of new miRNAs.
Three-dimensional chromosomal organisation in E.coli.
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Undergraduate
students : |
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Past
Members |
Olivia
Doppelt - Undergrad 2004, UPMC, Yeast Transcriptome and Proteome: analysis
of RNA structures |
| Thomas
Avril - Undergrad 2004, UPMC, Phylogenies and trees comparison |
| Sophie
Abby - Undergrad 2005, P7, Protein evolution, index SOV |
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Thomas
Rolland - Undergrad 2005, P7, Protein Data Bases, Phylogeny |
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Master
students : |
| Anissa
Sadik - Master 2005, Université d'Evry, Comparison of Plasmodium
genomes, 3'UTR analysis |
| Alexis
Darrasse - Master 2006, UPMC, Biological networks and Bolzmanian generation
of random networks |
| Pierre
Franquin - Master 2006, UPMC, Combinatorics
of phylogenetic trees, detection of protein binding sites |
| Gaëtan
Poncelin de Raucourt - Master 2006, P7, Viral genomic signatures |
| Ladislas
Trojan - Master 2006, UPMC, Proteins evolution and detection of protein
binding sites |
| Stephane
Peugeot - Master 2008, P7, Annotation structurale de Plasmodium falciparum
par threading |
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| Postdocs
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| Sophie
Sacquin-Mora- postdoc 2005-06, AFM/CNRS/IBM, Protein-protein interactions
and molecular docking |
| Stefan
Engelen- postdoc 2006-2008, AFM/CNRS/IBM, Protein evolution, detection of
protein binding sites |
| Yann
Ponty - postdoc 2008, AFM/CNRS/IBM, Protein-protein interactions and detection
of protein partners |
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| Phd
Students: |
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Julie
Baussand - PhD student - sept 04- mar 08. Current position: EMBO Fellow, Division of Mathematical Biology, National Institute for Medical Research, London, UK
"Evolution
des séquences protéiques:
signatures hydrophobes et réseaux
d'acides aminés
co-évolués" |
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