1. A.Carbone, A.Zinovyev, F.Képès, Codon Adaptation Index as a measure for dominating codon bias , Bioinformatics, 19:2005-2015, 2003.

2. A.Carbone, F.Képès, A.Zinovyev, Codon bias signatures, organisation of microorganisms in codon space and lifestyle, Molecular Biology and Evolution, 22(3):547--561, 2004.

3. A.Carbone, R.Madden, Insights on the evolution of metabolic networks of unicellular translationally biased organisms from transcriptomic data and sequence analysis, Journal of Molecular Evolution, 61:456–469, 2005.

4. A.Carbone, Computational prediction of genomic functional cores specific to different microbes, Journal of Molecular Evolution, 63(6):733-746, 2006.

5. J.Baussand,C.Deremble, A.Carbone, Periodic distribution of hydrophobic amino acids allows the definition of fundamental building blocks to align distantly related proteins, Proteins: Structure, Function and Bioinformatics, 67(3):695-708, 2007.

6. S.Engelen, L.A.Trojan, S.Sacquin-Mora, R.Lavery, A.Carbone, Joint Evolutionary Trees : a large scale method to predict protein interfaces based on sequence sampling, PLoS Computational Biology, 2008. In press.

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